Molecular Characterization and Differential Expression of Virulence Genes in Pseudomonas aeruginosa Isolates from Diverse Clinical Sources
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Background: Different types of illnesses, like burns, wounds and urinary tract infections, caused by pathogen Pseudomonas aeruginosa. This is because having a wide range of virulence factors, which allow it to harm the host's immune defenses and cause damage.
Objectives: The aim of this study was to isolate P. aeruginosa from different clinical sources and investigate molecular detection of virulence genes and the variation in gene expression of exoT, exoU, in P. aeruginosa isolates.
Materials and Methods: Collected eighty samples from various clinical sources such as burns, wounds and urine infection from patients attending to AL-Diwaniyah Teaching Hospital and Burns Hospital in AL-Diwaniyah governorate, from period 1/10/2024 to 1/1/2025. The samples were cultivated on culture media and depending on microscopic, morphological traits, biochemical tests and Vitek system the isolates were identified. Technique polymerase chain reaction (PCR) was used to molecular detect of (exoT, exoU) genes and technique Real Time PCR examined the gene expression of (exoT, exoU) genes in P. aeruginosa isolates.
Results: The results revealed that P. aeruginosa isolates constituted 12 (15%) of the total samples, distributed among five isolates from burns and five from wounds, representing 16% and 14%, respectively, and two (13%) isolates from urine samples. The results showed that all isolates contained exoT and exoU genes at a rate 100%. Significant differences were observed in the level of gene expression of the genes, as it was found in P. aeruginosa isolates from wounds, exoU gene showed the highest level of gene expression (22.53±14.21a) compared to the rest of the clinical sources. In contrast, exoT gene expression level was found to be relatively stable across all isolates.
Conclusion: P. aeruginosa is a pathogen that causes urinary tract infections, burns, and wounds. Virulence genes exoT, exoU were present in all isolates, but the most highly expressed gene in wound samples was exoU compared to the rest of the clinical sources.
1. C. Liao, X. Huang, Q. Wang, D. Yao, and W. Lu. “Virulence Factors of Pseudomonas aeruginosa and Antivirulence Strategies to Combat Its Drug Resistance”, Front Cell Infect Microbiol, vol.6, no.12, pp.926758, 2022. doi: 10.3389/fcimb.2022.926758.
2. C. Vidaillac, and S. H. Chotirmall, “Pseudomonas aeruginosa in bronchiectasis: infection, inflammation, and therapies”, Expert Rev. Respir. Med, vol. 15, no. 5, pp. 649–662, 2021. DOI: 10.1080/17476348.2021.1906225.
3. S.H. Shafikhani, and J. Engel, “Pseudomonas aeruginosa type III-secreted toxin ExoT inhibits host-cell division by targeting cytokinesis at multiple steps”, PNAS, vol. 103 no. 42, pp. 15605–15610, 2006. DOI: 10.1073/pnas.0605949103.
4. S. Mahdavi, and S. Dadashi, “Frequency of Some Important Exotoxin Genes in Pseudomonas aeruginosa Samples Isolated from Bovine Mastitis in Tabriz City in 2022 Gene Cell Tissue”, vol. 11, no. 1, pp. e138803, 2024. DOI: 10.5812/gct-138803.
5. A. R. Hauser, “The type III secretion system of Pseudomonas aeruginosa: infection by injection”, Nature Reviews Microbiology, vol. 7, no. 9, pp. 654-665, 2009. DOI: 10.1038/nrmicro2199.
6. V.T. Lee, R.S. Smith, B. Tummler, and S. Lory, “Activities of Pseudomonas aeruginosa effectors secreted by the type III secretion system in vitro and during infection”, Infect Immun, vol. 73, no. 3, pp. 1695–1705, 2005. DOI: 10.1128/IAI.73.3.1695-1705.2005.
7. M. H. Park, S.Y. Kim, E.Y. Roh, and H.S. Lee, “Difference of Type 3 secretion system (T3SS) effector gene genotypes (exoU and exoS) and its implication to antibiotics resistances in isolates of Pseudomonas aeruginosa from chronic otitis media”, Auris. Nasus. Larynx, vol. 44, no. 3, pp. 258–265, 2017. https://doi.org/10.1016/j.anl.2016.07.005.
8. A.A. El Solh, M.E. Akinnusi, J.P. Wiener-Kronish, S.V. Lynch, L.A. Pineda, and K. Szarpa, “Persistent infection with Pseudomonas aeruginosa in ventilator-associated pneumonia”, Am. J. Respir. Crit. Care Med, vol. 178, no. 5, pp. 513–519, 2008. doi: 10.1164/rccm.200802-239OC.
9. T. Sawa, “The molecular mechanism of acute lung injury caused by Pseudomonas aeruginosa: from bacterial pathogenesis to host response”, Journal of Intensive Care, vol. 2, no. 1, pp. 10, 2014. DOI: 10.1186/2052-0492-2-10.
10. J. F. MacFaddin, “Biochemical Tests for Identification of Medical Bacteria”, 3rd ed., Philadelphia: Lippincott Williams & Wilkins. 2000.
11. B. A. Forbes, F. S. Daniel, and S. W. Alice, “Bailey and scott's diagnostic microbiology”, 12th ed. Mosby Elsevier Company. USA. 2007.
12. U. S. Ş. Coşkun, and Y. Dagcioglu, “Evaluation of toxin-antitoxin genes, antibiotic resistance, and virulence genes in Pseudomonas aeruginosa isolates”, Rev Assoc Med Bras, vol. 69, no. 1, pp. 51-55, 2023. https://doi.org/10.1590/1806-9282.20220493.
13. K. J. Livak, and T.D Schmittgen, “Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method”, Methods, vol. 25, no. 4, pp. 402-8, 2001. DOI: 10.1006/meth.2001.1262.
14. W.W. Daniel, and C. L. Cross, “Biostatistics: a foundation for analysis in the health sciences”, BWiley, 2018.
15. A. Shidiki, B.R. Pandit, and A. Vyas, “Characterization and antibiotic profile of Pseudomonas aeruginosa isolated from patients visiting National Medical College and Teaching Hospital Nepal”, Acta Scientific Pharmaeutical Sciences, vol. 3, no. 7, pp. 2–6, 2019. DOI: 10.31080/ASPS.2019.03.0296.
16. A.B. Mahmoud, W.A. Zahran, G.R. Hindawi, A.Z. Labib, and R. Galal, “Prevalence of multidrug-resistant Pseudomonas aeruginosa in patients with nosocomial infections at a university hospital in Egypt, with special reference to typing methods”, J Virol Microbiol, vol. 20213, no. 2013, pp.1–13, 2013. DOI: 10.5171/2013.290047.
17. R. F. Polse, H. M. Khalid, and W.M. S. Mero, “Molecular Identification and Detection of Virulence Genes among Pseudomonas aeruginosa Isolated from Burns Infections”, J Contemp Med Sci, vol. 10, no. 1, pp. 07–12, 2024. DOI: https://doi.org/10.22317/jcms.v10i1.1415.
18. G. Horna, and J. Ruiz, “Type 3 secretion system of Pseudomonas aeruginosa. Microbiol”, Res, vol. 246, pp. 126719, 2021. DOI: 10.1016/j.micres.2021.126719.
19. G. C. Nolasco-Romero, F. J. P. Galbarro, R.N. J. Juarez, U. G. Ramirez, J.C. Cancino-Díaz, B. L. Marceliano, M. R. Apodaca, M. A. A. Romero, G. E. Rodea, L. P. Villalon, I.P. Ortega, F. S. Santos, M. M. Galván, and N.V. Guadarrama, “The exoS, exoT, exoU and exoY Virulotypes of the Type 3 Secretion System in Multidrug Resistant Pseudomonas aeruginosa as a Death Risk Factor in Pediatric Patients”, Pathogens, vol. 13, no. 1030, pp. 1-14, 2024. https://doi.org/10.3390/pathogens13121030.
20. A.A. Gawish, N.A. Mohammed, and G.A. El-Shennawy, “An investigation of type 3 secretion toxins encoding-genes of Pseudomonas aeruginosa isolates in a University Hospital in Egypt”, J Microbiol Infect Dis, vol. 3, no. 3, pp. 116-22, 2013. https://doi.org/10.5799/ahinjs.02.2013.03.0093.
21. S. A. Attiah, G. H. Majeed, and T. K. Mohammed, “Molecular Detection of Virulence exoU and toxA Genes in Pseudomonas aeruginosa from Patients in Baghdad City”, A Thesis Submitted to the College Council of Health and Medical Technology as Partial Fulfillment of the Requirements for the Degree of Master of Technology in Medical Laboratory Technology. 2021.
22. M. Dadmanesh, M. Pilehvarzadeh, M. Eramabadi, P. Eramabadi, M.B. Moghadam, and F. Mashayekhi, “Community acquired Pseudomonas aeroginosa urinary tract infections in children hospitalized in a Baqiatallah hospital, Tehran, Iran: Virulence profile and antibiotic resistance properties”, Biosci Biotech Res Asia, vol. 11, no. 2, pp. 417–426, 2014. DOI: 10.13005/bbra/1290.
23. A.M. Holban, M.C. Chifiriuc, A.I. Cotar, C. Bleotu, A.M. Grumezescu, O. Banu, and et al, “Virulence markers in Pseudomonas aeruginosa isolates from hospital acquired infections occurred in patients with underlying cardiovascular disease”, Rom Biotechnol Letters, vol. 18, no.6, pp. 8843–54, 2013.
24. F. A. Abdi, and et al, “Prevalence and antimicrobial-resistant patterns of Pseudomonas aeruginosa among burn patients attending Yekatit 12 Hospital Medical College in Addis Ababa, Ethiopia”, PLoS One, vol. 19, no. 3, pp. e0289586, 2024. https://doi.org/10.1371/journal.pone.0289586.
25. M. Yadav, R. Ahmed, S. Shukla, N. Afaq, D. Kumar, S. Pandey, and G. Kumar, “Molecular characterization of ExoT Gene in Pseudomonas aeruginosa and its Antibiogram with the Ability of Biofilm Formation”, Afr. J. Bio. Sc, vol. 6, no. 4, 2024.
26. D. Foulkes, K. McLean, A. Haneef, D. Fernig, C. Winstanley, N. Berry, and S. B. Kaye, “Pseudomonas aeruginosa Toxin ExoU as a Therapeutic Target in the Treatment of Bacterial Infections”, Microorganisms, vol. 7, no. 12, pp. 707, 2019. doi: 10.3390/microorganisms7120707.
27. N. Cramer, J. Klockgether, K. Wrasman, M. Schmidt, C. Davenport, and B. Tümmler, “Microevo- lution of the major common Pseudomona saeruginosa clones C and PA14incysticfibrosislungs”, Environ. Microbiol, vol. 13, no. 7, pp. 1590-1604, 2011. doi: 10.1016/S1569-1993(11)60168-9.
28. A. Roy-Burman, R.H. Savel, S. Racine, S B.L. Wanson, N.S. Revadigr, J. Fujimoto, and et al, “Type III protein secretion is associated with death in lower respiratory and systemic Pseudomonas aeruginosa infections”, J Infect Dis, vol. 183, no. 12, pp. 1767-74, 2001. DOI: 10.1086/320737.

